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DSC2 desmocollin 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 455353, updated on 17-Aug-2024

Summary

Official Symbol
DSC2provided by VGNC
Official Full Name
desmocollin 2provided by VGNC
Primary source
VGNC:VGNC:5156
Locus tag
CK820_G0019350
See related
Ensembl:ENSPTRG00000009941
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

Location:
chromosome: 17
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 17 NC_072415.2 (40861051..40897456, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 18 NC_072416.1 (39784178..39820586, complement)

Chromosome 17 - NC_072415.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene desmocollin 3 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC104003117 Neighboring gene desmocollin 1 Neighboring gene desmoglein 1 Neighboring gene uncharacterized LOC107969464 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in desmosome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072415.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    40861051..40897456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_512077.9XP_512077.5  desmocollin-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8MLT1, A0A6D2W1G2, H2QEE0
  2. XM_003315842.7XP_003315890.3  desmocollin-2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3SDG1, A0A2J8MLT4, A0A6D2WNK6