U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NPLOC4 NPL4 homolog, ubiquitin recognition factor [ Pan troglodytes (chimpanzee) ]

Gene ID: 454960, updated on 29-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
NPLOC4provided by VGNC
Official Full Name
NPL4 homolog, ubiquitin recognition factorprovided by VGNC
Primary source
VGNC:VGNC:10261
Locus tag
CK820_G0047985
See related
Ensembl:ENSPTRG00000009764
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NPLOC4 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (94960886..95041063, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (93145193..93225370, complement)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene fascin actin-bundling protein 2, retinal Neighboring gene FA core complex associated protein 100 Neighboring gene tetraspanin 10 Neighboring gene phosphodiesterase 6G

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nuclear protein localization protein 4 homolog
Names
nuclear protein localization 4 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    94960886..95041063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003315770.6 → XP_003315818.1  nuclear protein localization protein 4 homolog isoform X1

    See identical proteins and their annotated locations for XP_003315818.1

    UniProtKB/TrEMBL
    A0A2J8JG77, A0A6D2WA42, H2QE26, K7ADN8
    Related
    ENSPTRP00000068574.1
    Conserved Domains (5) summary
    smart00547
    Location:584 → 606
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:584 → 603
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05020
    Location:105 → 245
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:249 → 556
    NPL4; NPL4 family
    pfam11543
    Location:6 → 79
    UN_NPL4; Nuclear pore localization protein NPL4

  2. XM_009433499.5 → XP_009431774.1  nuclear protein localization protein 4 homolog isoform X3

    UniProtKB/TrEMBL
    A0A2J8JG71, H2QE26
    Conserved Domains (3) summary
    pfam05020
    Location:105 → 245
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:249 → 556
    NPL4; NPL4 family
    pfam11543
    Location:6 → 79
    UN_NPL4; Nuclear pore localization protein NPL4

  3. XM_063799429.1 → XP_063655499.1  nuclear protein localization protein 4 homolog isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials