SPTB spectrin beta, erythrocytic [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: SPTBprovided by VGNC
Official Full Name: spectrin beta, erythrocyticprovided by VGNC
Primary source: VGNC:VGNC:9162
Locus tag: CK820_G0002672
See related: Ensembl:ENSPTRG00000006443
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 15

Exon count:: 37

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	15	NC_072413.2 (62725156..62862142, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	14	NC_072412.1 (55992370..56129328, complement)

Chromosome 15 - NC_072413.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

G32682 (e-PCR)
- UniSTS:117264

RH36893 (e-PCR)
- UniSTS:84759

GDB:434768 (e-PCR)
- UniSTS:157209

A009N16 (e-PCR)
- UniSTS:30241

D14S830 (e-PCR)
- UniSTS:59683

WI-11388 (e-PCR)
- UniSTS:65590

RH68567 (e-PCR)
- UniSTS:36667

D20S860 (e-PCR)
- UniSTS:55107

G09428 (e-PCR)
- UniSTS:51553

D14S1306 (e-PCR)
- UniSTS:39778

u00828 (e-PCR)
- UniSTS:66950

SHGC-79955 (e-PCR)
- UniSTS:101519

RH91150 (e-PCR)
- UniSTS:92565

D14S817E (e-PCR)
- UniSTS:153792

D14S1213 (e-PCR)
- UniSTS:30435

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables actin filament binding	IEA Inferred from Electronic Annotation more info	PubMed
enables phospholipid binding	IEA Inferred from Electronic Annotation more info	PubMed
enables structural constituent of cytoskeleton	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in actin cytoskeleton organization	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cell junction	IEA Inferred from Electronic Annotation more info	PubMed
located_in cell projection	IEA Inferred from Electronic Annotation more info	PubMed
located_in cortical actin cytoskeleton	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
part_of spectrin	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: spectrin beta chain, erythrocyte; spectrin beta chain, erythrocytic

Names: spectrin, beta, erythrocytic (includes spherocytosis, clinical type I)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

62725156..62862142 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_024348751.3 → XP_024204519.3 spectrin beta chain, erythrocytic isoform X1

UniProtKB/TrEMBL

A0A2J8PIF9
XM_063793553.1 → XP_063649623.1 spectrin beta chain, erythrocytic isoform X1

UniProtKB/TrEMBL

A0A2J8PIF9
XM_024348752.3 → XP_024204520.3 spectrin beta chain, erythrocytic isoform X2

UniProtKB/TrEMBL

A0A2J8PIF9