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KRT80 keratin 80 [ Pan troglodytes (chimpanzee) ]

Gene ID: 451916, updated on 17-Aug-2024

Summary

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Official Symbol
KRT80provided by VGNC
Official Full Name
keratin 80provided by VGNC
Primary source
VGNC:VGNC:13162
Locus tag
CK820_G0039610
See related
Ensembl:ENSPTRG00000004968
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (43676036..43704924)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (42349806..42378692)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene thiol S-methyltransferase TMT1A-like Neighboring gene uncharacterized LOC134807475 Neighboring gene long intergenic non-protein coding RNA 2874 Neighboring gene olfactory receptor 7E24-like Neighboring gene small integral membrane protein 41 Neighboring gene autophagy related 101

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of skin epidermis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratinization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratin, type II cytoskeletal 80

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    43676036..43704924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054663303.2 → XP_054519278.2  keratin, type II cytoskeletal 80 isoform X2

    UniProtKB/TrEMBL
    A0A2I3SIC6, A0A2J8KDH8, A0A6D2XDS9, H2QWE4

  2. XM_016923357.3 → XP_016778846.3  keratin, type II cytoskeletal 80 isoform X1

    UniProtKB/TrEMBL
    A0A2I3SIC6, A0A2J8KDI1, A0A6D2WRM6, H2R7E1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials