PPIF peptidylprolyl isomerase F [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PPIFprovided by VGNC
Official Full Name: peptidylprolyl isomerase Fprovided by VGNC
Primary source: VGNC:VGNC:7857
Locus tag: CK820_G0007754
See related: Ensembl:ENSPTRG00000002669
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	8	NC_072406.2 (91559739..91567690)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	10	NC_072408.1 (82181341..82188671)

Chromosome 8 - NC_072406.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

SHGC-82268 (e-PCR)
- UniSTS:104215

SHGC-156301 (e-PCR)
- UniSTS:182329

D10S1558 (e-PCR)
- UniSTS:24393

RH119664 (e-PCR)
- UniSTS:133033

D10S2355 (e-PCR)
- UniSTS:71127

G20689 (e-PCR)
- UniSTS:27376

A006B47 (e-PCR)
- UniSTS:27377

RH102938 (e-PCR)
- UniSTS:97272

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables peptidyl-prolyl cis-trans isomerase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cellular response to hydrogen peroxide	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein folding	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein peptidyl-prolyl isomerization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of mitochondrial membrane permeability involved in programmed necrotic cell death	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: peptidyl-prolyl cis-trans isomerase F, mitochondrial

Names: peptidylprolyl isomerase F (cyclophilin F)

XP_016774224.1

EC 5.2.1.8

XP_024202234.1

EC 5.2.1.8

XP_507866.2

EC 5.2.1.8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

91559739..91567690

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_507866.8 → XP_507866.2 peptidyl-prolyl cis-trans isomerase F, mitochondrial isoform X1

See identical proteins and their annotated locations for XP_507866.2

UniProtKB/TrEMBL

A0A2I3SKT9, A0A2J8NTV1, A0A6D2XB90, H2Q253

Related

ENSPTRP00000004647.3

Conserved Domains (1) summary

cd01926
Location:46 → 204

cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
XM_024346466.3 → XP_024202234.1 peptidyl-prolyl cis-trans isomerase F, mitochondrial isoform X3

UniProtKB/TrEMBL

A0A2J8NTW0

Conserved Domains (1) summary

cl00197
Location:46 → 162

cyclophilin; cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug ...
XM_016918735.4 → XP_016774224.1 peptidyl-prolyl cis-trans isomerase F, mitochondrial isoform X2

UniProtKB/TrEMBL

A0A2J8NTW2

Conserved Domains (1) summary

cl00197
Location:46 → 163

cyclophilin; cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug ...