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    pex10 peroxisome biogenesis factor 10 [ Danio rerio (zebrafish) ]

    Gene ID: 449821, updated on 22-May-2013
    Official Symbol
    pex10provided by ZNC
    Official Full Name
    peroxisome biogenesis factor 10provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041010-71
    Locus tag
    CH73-78I7.1
    See related
    Ensembl:ENSDARG00000041511; Vega:OTTDARG00000028915
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:103520
    Location :
    chromosome: 8
    Sequence :
    Chromosome: 8; NC_007119.5 (49475943..49485787, complement)
    See pex10 in MapViewer

    Chromosome 8 - NC_007119.5Genomic Context describing neighboring genes Neighboring gene novel protein similar to PIM oncogene family Neighboring gene 5,10-methylenetetrahydrofolate reductase (NADPH) Neighboring gene 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-2-like Neighboring gene 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-2-like

    • Peroxisome, organism-specific biosystem (from KEGG)
      Peroxisome, organism-specific biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
    • Peroxisome, conserved biosystem (from KEGG)
      Peroxisome, conserved biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    peroxisome organization IEA
    Inferred from Electronic Annotation
    more info
     
    protein import into peroxisome matrix IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral to peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    peroxisome biogenesis factor 10
    Names
    peroxisome biogenesis factor 10

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005994.1NP_001005994.1  peroxisome biogenesis factor 10

      Status: PROVISIONAL

      Source sequence(s)
      BC083412
      UniProtKB/TrEMBL
      Q5XJ92
      Related
      ENSDARP00000060852, OTTDARP00000031652, ENSDART00000060853, OTTDART00000039583
      Conserved Domains (3) summary
      cd00162
      Location:265306
      Blast Score: 124
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      pfam04757
      Location:18235
      Blast Score: 319
      Pex2_Pex12; Pex2 / Pex12 amino terminal region
      pfam13923
      Location:265304
      Blast Score: 143
      zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)

    RefSeqs of Annotated Genomes: Build 5.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zv9 Primary Assembly

    Genomic

    1. NC_007119.5 Reference Zv9 Primary Assembly

      Range
      49475943..49485787, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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