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myoz1 myozenin 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 448363, updated on 17-Aug-2024

Summary

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Official Symbol
myoz1provided by Xenbase
Official Full Name
myozenin 1provided by Xenbase
Primary source
Xenbase:XB-GENE-987357
See related
Ensembl:ENSXETG00000010013
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
cs-2; fatz; myoz
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (44119900..44141094, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (52857764..52878940)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene ELOVL fatty acid elongase 3 Neighboring gene nucleolar and coiled-body phosphoprotein 1 Neighboring gene synaptopodin 2-like Neighboring gene SEC24 homolog C, COPII coat complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC89225

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
myozenin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006716.1 → NP_001006717.1  myozenin-1

    See identical proteins and their annotated locations for NP_001006717.1

    Status: PROVISIONAL

    Source sequence(s)
    BC075445
    UniProtKB/TrEMBL
    A0A6I8RBV1, F6YFD7, F7B6H7, Q6DIU0
    Related
    ENSXETP00000022060.3, ENSXETT00000022060.5
    Conserved Domains (1) summary
    pfam05556
    Location:5 → 311
    Calsarcin; Calcineurin-binding protein (Calsarcin)

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    44119900..44141094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012966388.3 → XP_012821842.1  myozenin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6I8RBV1, A0A8J0SIG8
    Related
    ENSXETP00000078444.2, ENSXETT00000093055.2
    Conserved Domains (1) summary
    pfam05556
    Location:1 → 292
    Calsarcin; Calcineurin-binding protein (Calsarcin)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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