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ogt.L O-linked N-acetylglucosamine (GlcNAc) transferase L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447694, updated on 11-Apr-2024

Summary

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Official Symbol
ogt.L
Official Full Name
O-linked N-acetylglucosamine (GlcNAc) transferase L homeolog
Primary source
Xenbase:XB-GENE-966153
Locus tag
XELAEV_18038645mg
See related
EnsemblRapid:ENSXLAG00005014682
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ogt
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Genomic context

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Location:
chromosome: 8L
Exon count:
25
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (34634714..34715265, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (21526536..21607427, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene regulator of nonsense transcripts 2-like Neighboring gene uncharacterized LOC108698321 Neighboring gene protein kinase C delta type-like Neighboring gene protein kinase C delta type Neighboring gene uncharacterized LOC121397011 Neighboring gene TATA-box binding protein associated factor 1 L homeolog Neighboring gene RHOG family member 2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80426

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
O-linked N-acetylglucosamine (GlcNAc) transferase L homeolog; UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Names
O-linked GlcNAc transferase
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    34634714..34715265 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018229083.2 → XP_018084572.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    UniProtKB/TrEMBL
    A0A8J0TF39

  2. XM_018229082.2 → XP_018084571.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    UniProtKB/TrEMBL
    A0A8J0TIL5

  3. XM_018229087.2 → XP_018084576.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X6

    UniProtKB/TrEMBL
    A0A8J1LGC3
    Conserved Domains (3) summary
    TIGR02917
    Location:9 → 351
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:154 → 182
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:303 → 860
    Glyco_transf_41; Glycosyl transferase family 41

  4. XM_041572674.1 → XP_041428608.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X6

    UniProtKB/TrEMBL
    A0A8J1LGC3
    Conserved Domains (3) summary
    TIGR02917
    Location:9 → 351
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:154 → 182
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:303 → 860
    Glyco_transf_41; Glycosyl transferase family 41

  5. XM_018229084.2 → XP_018084573.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4

    UniProtKB/TrEMBL
    A0A8J0T943

  6. XM_018229085.2 → XP_018084574.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X5

    UniProtKB/TrEMBL
    A0A8J0TGY5

  7. XM_041572673.1 → XP_041428607.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X3

    UniProtKB/TrEMBL
    A0A974C7L1, Q641I4
    Related
    ENSXLAP00005043010.1, ENSXLAT00005044078.1
    Conserved Domains (3) summary
    TIGR02917
    Location:22 → 465
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:327 → 355
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:476 → 1033
    Glyco_transf_41; Glycosyl transferase family 41

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001094364.1: Suppressed sequence

    Description
    NM_001094364.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
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