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cartpt.L CART prepropeptide L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447389, updated on 7-Sep-2023

Summary

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Official Symbol
cartpt.L
Official Full Name
CART prepropeptide L homeolog
Primary source
Xenbase:XB-GENE-6253986
Locus tag
XELAEV_18006564mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cart; CARTp; cartpt; cartpt.S
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Genomic context

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See cartpt.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (120819725..120828407)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (108565497..108570082)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 49 member 3 L homeolog Neighboring gene diacylglycerol kinase theta L homeolog Neighboring gene survival motor neuron protein Neighboring gene microtubule-associated protein 1S Neighboring gene acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Brain distribution and evidence for both central and neurohormonal actions of cocaine- and amphetamine-regulated transcript peptide in Xenopus laevis. Roubos EW, et al. J Comp Neurol, 2008 Apr 1. PMID 18220255
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. X. laevis, CARTp not only has multiple and not exclusively feeding-related actions in the brain but is also secreted as a neurohormone
    Title: Brain distribution and evidence for both central and neurohormonal actions of cocaine- and amphetamine-regulated transcript peptide in Xenopus laevis.
Submit: New GeneRIF Correction

General gene information

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Homology

Clone Names

  • MGC84672

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables neuropeptide hormone activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within adult feeding behavior IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cellular response to starvation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within negative regulation of appetite IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within positive regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
CART prepropeptide L homeolog
Names
CART prepropeptide S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094096.1 → NP_001087565.1  CART prepropeptide L homeolog precursor

    See identical proteins and their annotated locations for NP_001087565.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080109
    UniProtKB/TrEMBL
    Q68EU1
    Conserved Domains (1) summary
    pfam06373
    Location:37 → 106
    CART; Cocaine and amphetamine regulated transcript protein (CART)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    120819725..120828407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041581349.1 → XP_041437283.1  CART prepropeptide L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1M6I1
    Conserved Domains (1) summary
    pfam06373
    Location:43 → 112
    CART; Cocaine and amphetamine regulated transcript protein (CART)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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