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plpp3.L phospholipid phosphatase 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447215, updated on 18-Sep-2024

Summary

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Official Symbol
plpp3.L
Official Full Name
phospholipid phosphatase 3 L homeolog
Primary source
Xenbase:XB-GENE-6254148
Locus tag
XELAEV_18023034mg
See related
EnsemblRapid:ENSXLAG00005030463
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
lpp3; vcip; dri42; pap2b; plpp3; PPAP2B; plpp3.S; ppap2bb; ppap2b-b
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Genomic context

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Location:
chromosome: 4L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (82356491..82396191)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (77069111..77107988)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene FYN-binding protein 1 Neighboring gene protein kinase, AMP-activated, alpha 2 catalytic subunit L homeolog Neighboring gene uncharacterized LOC121402851 Neighboring gene uncharacterized LOC121403153

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phospholipid phosphatase 3 L homeolog
Names
phosphatidic acid phosphatase type 2B
phospholipid phosphatase 3 S homeolog
NP_001087391.1
XP_041445281.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093922.1 → NP_001087391.1  phospholipid phosphatase 3 L homeolog

    See identical proteins and their annotated locations for NP_001087391.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079709
    UniProtKB/TrEMBL
    A0A974D5U7, Q6AX87
    Related
    ENSXLAP00005091080.1, ENSXLAT00005092760.1
    Conserved Domains (1) summary
    cd03384
    Location:126 → 272
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    82356491..82396191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041589347.1 → XP_041445281.1  phospholipid phosphatase 3 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1MV09, A0A974D5U7
    Related
    ENSXLAP00005091179.1, ENSXLAT00005092859.1
    Conserved Domains (1) summary
    cd03384
    Location:125 → 271
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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