gtpbp6.S GTP binding protein 6 (putative) S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: gtpbp6.S
Official Full Name: GTP binding protein 6 (putative) S homeolog
Primary source: Xenbase:XB-GENE-967570
Locus tag: XELAEV_18015572mg
See related: EnsemblRapid:ENSXLAG00005030538
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: gtpbp6
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Genomic context

Location:: chromosome: 2S

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2S	NC_054374.1 (105805537..105816394, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2S	NC_030727.1 (96712661..96723509, complement)

Chromosome 2S - NC_054374.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables ribosome binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: putative GTP-binding protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093706.1 → NP_001087175.1 putative GTP-binding protein 6

See identical proteins and their annotated locations for NP_001087175.1

Status: PROVISIONAL

Source sequence(s)

BC078122

UniProtKB/Swiss-Prot

Q6DCC6

UniProtKB/TrEMBL

A0A974DJE2

Related

ENSXLAP00005091437.1, ENSXLAT00005093117.1

Conserved Domains (4) summary

cd01878
Location:265 → 466

HflX; HflX GTPase family

TIGR03156
Location:107 → 466

GTP_HflX; GTP-binding protein HflX

pfam13167
Location:132 → 218

GTP-bdg_N; GTP-binding GTPase N-terminal

pfam16360
Location:222 → 293

GTP-bdg_M; GTP-binding GTPase Middle Region

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

105805537..105816394 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)