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nipal4.S NIPA-like domain containing 4 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446454, updated on 7-Sep-2023

Summary

Official Symbol
nipal4.S
Official Full Name
NIPA-like domain containing 4 S homeolog
Primary source
Xenbase:XB-GENE-6256221
Locus tag
XELAEV_18019952mg
See related
EnsemblRapid:ENSXLAG00005021508
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nipal4; ichthyin
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Genomic context

Location:
chromosome: 3S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (10369878..10381157)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (10377745..10389012)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 7 S homeolog Neighboring gene cytoplasmic FMR1 interacting protein 2 S homeolog Neighboring gene ADAM metallopeptidase domain 19 S homeolog Neighboring gene LSM11, U7 small nuclear RNA associated S homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC78848

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables magnesium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within magnesium ion transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
NIPA-like domain containing 4 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093150.1NP_001086619.1  NIPA-like domain containing 4 S homeolog

    See identical proteins and their annotated locations for NP_001086619.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077186
    UniProtKB/TrEMBL
    A0A974D8H7, Q6DED8
    Related
    ENSXLAP00005063169.1, ENSXLAT00005064622.1
    Conserved Domains (1) summary
    cl23754
    Location:1243
    EamA; EamA-like transporter family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    10369878..10381157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018254285.2XP_018109774.1  NIPA-like domain containing 4 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8GR04, A0A974D7U4
    Related
    ENSXLAP00005063178.1, ENSXLAT00005064631.1