snx10.S sorting nexin 10 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: snx10.S
Official Full Name: sorting nexin 10 S homeolog
Primary source: Xenbase:XB-GENE-17343636
Locus tag: XELAEV_18033064mg
See related: EnsemblRapid:ENSXLAG00005003935
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

Location:: chromosome: 6S

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6S	NC_054382.1 (34131664..34159729)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6S	NC_030735.1 (33209430..33237410)

Chromosome 6S - NC_054382.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables phosphatidylinositol binding	IEA Inferred from Electronic Annotation more info
enables phosphatidylinositol phosphate binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within cilium assembly	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within intracellular protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within vesicle organization	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endosome	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: sorting nexin 10 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093136.1 → NP_001086605.1 sorting nexin 10 S homeolog

See identical proteins and their annotated locations for NP_001086605.1

Status: PROVISIONAL

Source sequence(s)

BC076870

UniProtKB/TrEMBL

Q6DF72

Related

ENSXLAP00005011774.1, ENSXLAT00005011948.1

Conserved Domains (1) summary

cl02563
Location:12 → 106

PX_domain; The Phox Homology domain, a phosphoinositide binding module

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

34131664..34159729

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041567176.1 → XP_041423110.1 sorting nexin 10 S homeolog isoform X1

UniProtKB/TrEMBL

A0A1L8FR87, A0A974CIM9

Related

ENSXLAP00005011778.1, ENSXLAT00005011952.1

Conserved Domains (1) summary

cd06898
Location:12 → 123

PX_SNX10; The phosphoinositide binding Phox Homology domain of Sorting Nexin 10