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bcap31.L B cell receptor associated protein 31 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446331, updated on 17-Aug-2024

Summary

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Official Symbol
bcap31.L
Official Full Name
B cell receptor associated protein 31 L homeolog
Primary source
Xenbase:XB-GENE-479516
Locus tag
XELAEV_18000027mg
See related
EnsemblRapid:ENSXLAG00005020455
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
bcap31
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Genomic context

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See bcap31.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (14077224..14094567, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694894.1 (26413..43870, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121396879 Neighboring gene small nucleolar RNA SNORD62 Neighboring gene ATP binding cassette subfamily D member 1 L homeolog Neighboring gene plexin B3 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wnt signalling regulates paxillin ubiquitination essential for mesodermal cell motility. Iioka H, et al. Nat Cell Biol, 2007 Jul. PMID 17558393
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC78871, MGC130706

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein localization to endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
B cell receptor associated protein 31 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093027.1 → NP_001086496.1  B cell receptor associated protein 31 L homeolog

    See identical proteins and their annotated locations for NP_001086496.1

    Status: PROVISIONAL

    Source sequence(s)
    BC110709
    UniProtKB/TrEMBL
    A0A8J0PYG0, A0A974BR45, A0A974H5D2, A0AA97PZB4, Q6DFT8
    Related
    ENSXLAP00005059881.1, ENSXLAT00005061330.1
    Conserved Domains (1) summary
    pfam05529
    Location:1 → 222
    Bap31; B-cell receptor-associated protein 31-like

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    14077224..14094567 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018242256.2 → XP_018097745.2  B cell receptor associated protein 31 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0U7C6, A0A974H5D2
    Related
    ENSXLAP00005059890.1, ENSXLAT00005061338.1
    Conserved Domains (1) summary
    PRK13902
    Location:141 → 230
    alaS; alanyl-tRNA synthetase; Provisional
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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