hells.L helicase, lymphoid specific L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: hells.L
Official Full Name: helicase, lymphoid specific L homeolog
Primary source: Xenbase:XB-GENE-5883885
Locus tag: XELAEV_18034801mg
See related: EnsemblRapid:ENSXLAG00005034681
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: lsh; pasg; hells; smarca6; nbla10143
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Genomic context

Location:: chromosome: 7L

Exon count:: 22

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	7L	NC_054383.1 (36564262..36590089)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	7L	NC_030736.1 (34172634..34198407)

Chromosome 7L - NC_054383.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Lsh Is Essential for Maintaining Global DNA Methylation Levels in Amphibia and Fish and Interacts Directly with Dnmt1.
Title: Lsh Is Essential for Maintaining Global DNA Methylation Levels in Amphibia and Fish and Interacts Directly with Dnmt1.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables ATP-dependent chromatin remodeler activity	IEA Inferred from Electronic Annotation more info
enables chromatin binding	IEA Inferred from Electronic Annotation more info
enables helicase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA methylation-dependent heterochromatin formation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within lymphocyte proliferation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within pericentric heterochromatin formation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info
located_in pericentric heterochromatin	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: helicase, lymphoid specific L homeolog

Names: Lymphocyte helicase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092973.1 → NP_001086442.1 helicase, lymphoid specific L homeolog

See identical proteins and their annotated locations for NP_001086442.1

Status: PROVISIONAL

Source sequence(s)

BC097562

UniProtKB/TrEMBL

A0A974HBG5, Q4V835, Q6DD35

Related

ENSXLAP00005103709.1, ENSXLAT00005105724.1

Conserved Domains (3) summary

cd00046
Location:241 → 383

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

pfam00176
Location:224 → 580

SNF2_N; SNF2 family N-terminal domain

pfam00271
Location:601 → 715

Helicase_C; Helicase conserved C-terminal domain