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LOC440181 transmembrane protein 98 pseudogene [ Homo sapiens (human) ]

Gene ID: 440181, updated on 17-Sep-2024

Summary

Gene symbol
LOC440181
Gene description
transmembrane protein 98 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LOC440181 in Genome Data Viewer
Location:
14q23.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (58827482..58828516, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (53034645..53035679, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (59294200..59295234, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102723725 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:59218720-59219442 Neighboring gene Sharpr-MPRA regulatory region 9975 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:59235232-59235813 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:59235814-59236394 Neighboring gene ribosomal protein L31 pseudogene 4 Neighboring gene long intergenic non-protein coding RNA 1500 Neighboring gene NANOG hESC enhancer GRCh37_chr14:59313280-59313820 Neighboring gene uncharacterized LOC124903325 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8455 Neighboring gene NANOG hESC enhancer GRCh37_chr14:59422881-59423382 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5802 Neighboring gene uncharacterized LOC107984692

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022840.2 

    Range
    8..1042
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    58827482..58828516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    53034645..53035679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)