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LOC4334219 dof zinc finger protein 4-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4334219, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4334219
Gene description
dof zinc finger protein 4-like
Locus tag
OSNPB_030764900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4334219 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (32633236..32634913, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (31662277..31663969, complement)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene transcription factor HHO5 Neighboring gene serine/threonine-protein kinase SAPK8-like Neighboring gene serine/threonine-protein kinase Aurora-3 Neighboring gene protein TUNICAMYCIN INDUCED 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dof zinc finger protein 4-like
Names
Dof-type zinc finger protein 09
Os03g0764900

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    32633236..32634913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015773932.3 → XP_015629418.1  dof zinc finger protein 4-like

    UniProtKB/TrEMBL
    A2XMA2, Q0DNA2, Q10EQ1, Q7Y0C1
    Conserved Domains (1) summary
    pfam02701
    Location:78 → 132
    zf-Dof; Dof domain, zinc finger
Nucleotide Protein
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