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NIPA2 non imprinted in Prader-Willi/Angelman syndrome 2 [ Gallus gallus (chicken) ]

Gene ID: 418680, updated on 3-Apr-2024

Summary

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Symbol
NIPA2provided by CGNC
Full Name
non imprinted in Prader-Willi/Angelman syndrome 2provided by CGNC
Primary source
CGNC:12551
See related
Ensembl:ENSGALG00010002860
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (130553610..130564626, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (130509582..130520591, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene cytoplasmic FMR1 interacting protein 1 Neighboring gene fibronectin type III domain-containing protein 9-like Neighboring gene non imprinted in Prader-Willi/Angelman syndrome 1 Neighboring gene uncharacterized LOC107051964

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of four highly conserved genes between breakpoint hotspots BP1 and BP2 of the Prader-Willi/Angelman syndromes deletion region that have undergone evolutionary transposition mediated by flanking duplicons. Chai JH, et al. Am J Hum Genet, 2003 Oct. PMID 14508708, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in magnesium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
magnesium transporter NIPA2
Names
NIPA magnesium transporter 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030809.2 → NP_001025980.2  magnesium transporter NIPA2 isoform a

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000025
    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2
    Related
    ENSGALP00010004061.1, ENSGALT00010006622.1
    Conserved Domains (1) summary
    pfam05653
    Location:8 → 302
    Mg_trans_NIPA; Magnesium transporter NIPA

  2. NM_001398021.1 → NP_001384950.1  magnesium transporter NIPA2 isoform a

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000025
    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2
    Conserved Domains (1) summary
    pfam05653
    Location:8 → 302
    Mg_trans_NIPA; Magnesium transporter NIPA

  3. NM_001398022.1 → NP_001384951.1  magnesium transporter NIPA2 isoform a

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000025
    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2
    Conserved Domains (1) summary
    pfam05653
    Location:8 → 302
    Mg_trans_NIPA; Magnesium transporter NIPA

  4. NM_001398023.1 → NP_001384952.1  magnesium transporter NIPA2 isoform a

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000025
    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2
    Conserved Domains (1) summary
    pfam05653
    Location:8 → 302
    Mg_trans_NIPA; Magnesium transporter NIPA

  5. NM_001398025.1 → NP_001384954.1  magnesium transporter NIPA2 isoform b

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000025

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    130553610..130564626 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046940903.1 → XP_046796859.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2

  2. XM_040699073.2 → XP_040555007.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2, Q8AY37
    Related
    ENSGALP00010004059.1, ENSGALT00010006620.1
    Conserved Domains (1) summary
    pfam05653
    Location:8 → 302
    Mg_trans_NIPA; Magnesium transporter NIPA

  3. XM_046940906.1 → XP_046796862.1  magnesium transporter NIPA2 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    130509582..130520591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046908045.1 → XP_046764001.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2

  2. XM_046908044.1 → XP_046764000.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2

  3. XM_046908046.1 → XP_046764002.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2

  4. XM_046908043.1 → XP_046763999.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2

  5. XM_046908042.1 → XP_046763998.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2

  6. XM_046908047.1 → XP_046764003.1  magnesium transporter NIPA2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P920, F1NBX2

  7. XM_046908048.1 → XP_046764004.1  magnesium transporter NIPA2 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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