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CECR5L cat eye syndrome chromosome region, candidate 5-like [ Gallus gallus (chicken) ]

Gene ID: 415969, updated on 19-Sep-2023

Summary

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Gene symbol
CECR5L
Gene description
cat eye syndrome chromosome region, candidate 5-like
See related
Ensembl:ENSGALG00010027938
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

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Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (5257328..5268334)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (5281754..5292531)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene CCHC-type zinc finger nucleic acid binding protein Neighboring gene atherin-like Neighboring gene ISY1 splicing factor homolog Neighboring gene KIAA1257 Neighboring gene RAB43, member RAS oncogene family Neighboring gene glycoprotein IX platelet

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in glycerophospholipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
haloacid dehalogenase-like hydrolase domain-containing 5
Names
cat eye syndrome critical region protein 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5257328..5268334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_414312.8 → XP_414312.3  haloacid dehalogenase-like hydrolase domain-containing 5

    UniProtKB/TrEMBL
    A0A8V1AID4
    Related
    ENSGALP00010041462.1, ENSGALT00010067719.1
    Conserved Domains (2) summary
    TIGR01460
    Location:50 → 326
    HAD-SF-IIA; Haloacid Dehalogenase Superfamily Class (subfamily) IIA
    pfam13344
    Location:50 → 152
    Hydrolase_6; Haloacid dehalogenase-like hydrolase

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5281754..5292531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040682113.2 → XP_040538047.1  haloacid dehalogenase-like hydrolase domain-containing 5

    Conserved Domains (1) summary
    TIGR01456
    Location:48 → 326
    CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
Nucleotide Protein
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