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SH3PX1 sorting nexin 33-like protein SH3PX1 [ Apis mellifera (honey bee) ]

Gene ID: 413831, updated on 15-May-2024

Summary

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Gene symbol
SH3PX1
Gene description
sorting nexin 33-like protein SH3PX1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB46248
Orthologs
fruit fly all
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Genomic context

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See SH3PX1 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
5
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG7 NC_037644.1 (1413344..1416160)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG7 NC_007076.3 (2164075..2166853, complement)

Linkage Group LG7 - NC_037644.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC727260 Neighboring gene eukaryotic translation initiation factor 3 subunit h Neighboring gene Calcium/calmodulin-dependent protein kinase I Neighboring gene coiled-coil domain-containing protein 174 Neighboring gene Non-SMC element 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin lst-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037644.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    1413344..1416160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_397270.7 → XP_397270.3  sorting nexin lst-4

    UniProtKB/TrEMBL
    A0A7M7R7B3, A0A8B9B5V7
    Conserved Domains (3) summary
    cd06862
    Location:195 → 319
    PX_SNX9_18_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 9 and 18
    cd07626
    Location:338 → 535
    BAR_SNX9_like; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 9 and Similar Proteins
    cd11763
    Location:5 → 60
    SH3_SNX9_like; Src Homology 3 domain of Sorting Nexin 9 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials