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Ccm3 programmed cell death protein 10 Ccm3 [ Apis mellifera (honey bee) ]

Gene ID: 412160, updated on 15-May-2024

Summary

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Gene symbol
Ccm3
Gene description
programmed cell death protein 10 Ccm3
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB46911
Orthologs
fruit fly all
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Genomic context

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See Ccm3 in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
5
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG3 NC_037640.1 (4461188..4462563, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG3 NC_007072.3 (2404434..2405833)

Linkage Group LG3 - NC_037640.1Genomic Context describing neighboring genes Neighboring gene mitoguardin Neighboring gene uncharacterized LOC551539 Neighboring gene Actin-related protein 2/3 complex, subunit 5 Neighboring gene Pre-mRNA-splicing factor SYF1 fand Neighboring gene F-box protein 42 Neighboring gene KDEL motif-containing protein 1 Neighboring gene basic proline-rich protein Neighboring gene copper chaperone for superoxide dismutase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of FAR/SIN/STRIPAK complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
programmed cell death protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037640.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    4461188..4462563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_395623.7 → XP_395623.2  programmed cell death protein 10

    UniProtKB/TrEMBL
    A0A7M7R5S9, A0A8B9B5U7
    Conserved Domains (1) summary
    pfam06840
    Location:6 → 158
    DUF1241; Protein of unknown function (DUF1241)
Nucleotide Protein Strain
Heading Accession and Version

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