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LOC409709 putative glucosylceramidase 4 [ Apis mellifera (honey bee) ]

Gene ID: 409709, updated on 9-Nov-2023

Summary

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Gene symbol
LOC409709
Gene description
putative glucosylceramidase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB13722; GB53579
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Genomic context

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Location:
chromosome: LG6
Exon count:
7
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG6 NC_037643.1 (15037182..15039633)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG6 NC_007075.3 (15420114..15422556)

Linkage Group LG6 - NC_037643.1Genomic Context describing neighboring genes Neighboring gene apisimin Neighboring gene glucosylceramidase-like Neighboring gene uncharacterized LOC102656621 Neighboring gene mitochondrial ribosomal protein S30 Neighboring gene guanine nucleotide-binding protein-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative glucosylceramidase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037643.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    15037182..15039633
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_393208.7 → XP_393208.1  putative glucosylceramidase 4

    UniProtKB/TrEMBL
    A0A7M7R5K0, A0A8B9AWZ2
    Conserved Domains (1) summary
    cl23815
    Location:22 → 508
    Glyco_hydro_30; O-Glycosyl hydrolase family 30
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials