U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC409165 calreticulin [ Apis mellifera (honey bee) ]

Gene ID: 409165, updated on 25-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
LOC409165
Gene description
calreticulin
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
Crc; GB40461
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG8
Exon count:
8
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG8 NC_037645.1 (2280370..2283856)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG8 NC_007077.3 (2389084..2393205)

Linkage Group LG8 - NC_037645.1Genomic Context describing neighboring genes Neighboring gene enoyl Coenzyme A hydratase, short chain, 1, mitochondrial Neighboring gene uncharacterized LOC727647 Neighboring gene uncharacterized LOC727649 Neighboring gene E3 ubiquitin-protein ligase TRIM23 Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
calreticulin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037645.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    2280370..2283856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006559506.3 → XP_006559569.1  calreticulin

    UniProtKB/TrEMBL
    A0A7M7GLV6, A0A8B6YTC2
    Conserved Domains (1) summary
    pfam00262
    Location:22 → 331
    Calreticulin; Calreticulin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials