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nanos protein nanos [ Apis mellifera (honey bee) ]

Gene ID: 408956, updated on 10-May-2024

Summary

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Gene symbol
nanos
Gene description
protein nanos
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB14366; GB52596
Orthologs
fruit fly all
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Genomic context

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See nanos in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
3
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG8 NC_037645.1 (1204681..1212052, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG8 NC_007077.3 (1023931..1030923)

Linkage Group LG8 - NC_037645.1Genomic Context describing neighboring genes Neighboring gene phenoloxidase-activating factor 2 Neighboring gene serine protease 7 Neighboring gene zinc finger and BTB domain-containing protein 20 Neighboring gene uncharacterized LOC102655507 Neighboring gene uncharacterized LOC102655790 Neighboring gene uncharacterized LOC100576754

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein nanos
Names
GB14366-PA

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001040231.1 → NP_001035321.1  protein nanos

    See identical proteins and their annotated locations for NP_001035321.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ288392
    UniProtKB/TrEMBL
    A0A7M6UUL6, A0A8B6WZ54, A0A8U1BY20, Q2PZC1
    Conserved Domains (1) summary
    pfam05741
    Location:40 → 92
    zf-nanos; Nanos RNA binding domain

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037645.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    1204681..1212052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026442021.1 → XP_026297806.1  protein nanos isoform X2

    UniProtKB/TrEMBL
    A0A7M7MLK7, A0A8B8H1F1
    Conserved Domains (1) summary
    pfam05741
    Location:72 → 124
    zf-nanos; Nanos RNA binding domain

  2. XM_026442020.1 → XP_026297805.1  protein nanos isoform X1

    UniProtKB/TrEMBL
    A0A7M7SPF9, A0A8B8H1F0
    Conserved Domains (1) summary
    pfam05741
    Location:91 → 143
    zf-nanos; Nanos RNA binding domain
Nucleotide Protein Strain
Heading Accession and Version

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