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cnbp.L CCHC-type zinc finger nucleic acid binding protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 399294, updated on 5-Feb-2022

Summary

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Official Symbol
cnbp.L
Official Full Name
CCHC-type zinc finger nucleic acid binding protein L homeolog
Primary source
Xenbase:XB-GENE-919603
Locus tag
XELAEV_18002582mg
See related
EnsemblRapid:ENSXLAG00005000069
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
dm2; cnbp; znf9; cnbp1; cnbpa; promm; xcnbp; rnf163; zcchc22
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See cnbp.L in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (131584039..131590522, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694823.1 (1421029..1427613, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 2 S homeolog Neighboring gene BARX homeobox 1 S homeolog Neighboring gene IQ motif and SEC7 domain-containing protein 1 Neighboring gene Yip1 domain family member 4 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cellular nucleic acid binding protein
Names
cellular nucleic acid binding protein a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090613.1 → NP_001084082.1  cellular nucleic acid binding protein

    See identical proteins and their annotated locations for NP_001084082.1

    Status: PROVISIONAL

    Source sequence(s)
    U20977
    UniProtKB/TrEMBL
    Q91594
    Related
    ENSXLAP00005000097.1, ENSXLAT00005000121.1
    Conserved Domains (1) summary
    PTZ00368
    Location:45 → 162
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    131584039..131590522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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