psip1.S PC4 and SFRS1 interacting protein 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: psip1.S
Official Full Name: PC4 and SFRS1 interacting protein 1 S homeolog
Primary source: Xenbase:XB-GENE-1007143
Locus tag: XELAEV_18010051mg
See related: EnsemblRapid:ENSXLAG00005003670
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: paip; dfs70; ledgf; psip1; psip2
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Genomic context

Location:: chromosome: 1S

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (113337946..113364683)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1S	NC_030725.1 (100808693..100835430)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: PC4 and SFRS1 interacting protein 1 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089065.1 → NP_001082534.1 PC4 and SFRS1 interacting protein 1 S homeolog

See identical proteins and their annotated locations for NP_001082534.1

Status: PROVISIONAL

Source sequence(s)

BC070724

UniProtKB/TrEMBL

A0A974I158, Q6NRM3

Related

ENSXLAP00005010938.1, ENSXLAT00005011112.1

Conserved Domains (2) summary

cd05834
Location:3 → 87

HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...

pfam11467
Location:384 → 485

LEDGF; Lens epithelium-derived growth factor (LEDGF)