scnn1a sodium channel, non voltage gated 1 alpha subunit [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: scnn1aprovided by Xenbase
Official Full Name: sodium channel, non voltage gated 1 alpha subunitprovided by Xenbase
Primary source: Xenbase:XB-GENE-996083
See related: Ensembl:ENSXETG00000018954
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: besc2; enaca; scnea; scnn1; ENaCalpha; alpha-ENaC
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	7	NC_030683.2 (10167807..10194244)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	7	NC_030683.1 (1841367..1867703)

Chromosome 7 - NC_030683.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ligand-gated sodium channel activity	IEA Inferred from Electronic Annotation more info
enables sodium channel activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within monoatomic ion transmembrane transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within sodium ion transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in acrosomal vesicle	IEA Inferred from Electronic Annotation more info
located_in apical plasma membrane	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in motile cilium	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: amiloride-sensitive sodium channel subunit alpha

Names: sodium channel, nonvoltage-gated 1 alpha; sodium channel, nonvoltage-gated, type I, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001197195.1 → NP_001184124.1 amiloride-sensitive sodium channel subunit alpha

Status: VALIDATED

Source sequence(s)

BC064718

UniProtKB/TrEMBL

A0A6I8Q305, A0A6I8SH90, F7AE39

Related

ENSXETP00000041121.5, ENSXETT00000041121.5

Conserved Domains (1) summary

TIGR00859
Location:18 → 602

ENaC; sodium channel transporter