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NCU05427 ATP-dependent Clp protease [ Neurospora crassa OR74A ]

Gene ID: 3879398, updated on 6-Jun-2024

Summary

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Gene symbol
NCU05427
Gene description
ATP-dependent Clp protease
Primary source
FungiDB:NCU05427
Locus tag
NCU05427
See related
VEuPathDB:NCU05427
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Neurospora crassa OR74A (strain: OR74A)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora
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Genomic context

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See NCU05427 in Genome Data Viewer
Location:
other: II
Exon count:
3
Sequence:
Chromosome: II; NC_026502.1 (1603891..1606577, complement)

Linkage Group II - NC_026502.1Genomic Context describing neighboring genes Neighboring gene tricarboxylic acid-7 Neighboring gene WD repeat protein Neighboring gene 1,4-alpha-glucan branching enzyme Neighboring gene ATPase-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026502.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of the filamentous fungus Neurospora crassa. Galagan JE, et al. Nature, 2003 Apr 24. PMID 12712197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ATP-dependent Clp protease
ATP-dependent Clp protease, variant

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026502.1 Reference assembly

    Range
    1603891..1606577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011395277.1 → XP_011393579.1  ATP-dependent Clp protease, variant [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011393579.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9P5P1, V5IN31
    Conserved Domains (2) summary
    smart01086
    Location:481 → 552
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
    pfam07724
    Location:216 → 425
    AAA_2; AAA domain (Cdc48 subfamily)

  2. XM_011395276.1 → XP_011393578.1  ATP-dependent Clp protease [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011393578.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9P5P1, V5IPV9
    Conserved Domains (3) summary
    smart01086
    Location:509 → 580
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
    TIGR00390
    Location:86 → 580
    hslU; ATP-dependent protease HslVU, ATPase subunit
    pfam07724
    Location:244 → 453
    AAA_2; AAA domain (Cdc48 subfamily)
Nucleotide Protein
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