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5031410I06Rik RIKEN cDNA 5031410I06 gene [ Mus musculus (house mouse) ]

Gene ID: 381622, updated on 17-Aug-2024

Summary

Official Symbol
5031410I06Rikprovided by MGI
Official Full Name
RIKEN cDNA 5031410I06 geneprovided by MGI
Primary source
MGI:MGI:3036277
See related
Ensembl:ENSMUSG00000051940 AllianceGenome:MGI:3036277
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in ovary adult (RPKM 3.2), testis adult (RPKM 3.2) and 3 other tissues See more
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Genomic context

Location:
5 B1; 5 12.45 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (26303666..26310312, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (26098664..26105346, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RRS1 ribosome biogenesis regulator homolog pseudogene Neighboring gene spermatogenesis associated glutamate (E)-rich protein 4A2 Neighboring gene predicted gene, 52807 Neighboring gene predicted gene, 46905 Neighboring gene predicted gene 10220 Neighboring gene predicted gene, 46906 Neighboring gene STARR-seq mESC enhancer starr_12676 Neighboring gene predicted gene, 34067

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC381622

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_207657.3NP_997540.2  uncharacterized protein LOC381622

    Status: VALIDATED

    Source sequence(s)
    AC125090
    Consensus CDS
    CCDS51443.1
    UniProtKB/TrEMBL
    E9Q4E0, Q8BPC4
    Related
    ENSMUSP00000069697.3, ENSMUST00000063524.3
    Conserved Domains (1) summary
    pfam04822
    Location:52133
    Takusan; Takusan

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    26303666..26310312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)