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CG34056 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38106, updated on 10-May-2024

Summary

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Official Symbol
CG34056provided by FlyBase
Primary source
FLYBASE:FBgn0054056
Locus tag
Dmel_CG34056
See related
AllianceGenome:FB:FBgn0054056
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13904; CG13904-1; dC1GalT6; Dmel\CG34056
Summary
Enables beta-1,3-galactosyltransferase activity. Involved in protein glycosylation. Predicted to be located in membrane. Is expressed in embryonic/larval brain; follicle cell; gland; imaginal disc; and tracheal primordium. Orthologous to human C1GALT1 (core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG34056 in Genome Data Viewer
Location:
61D4-61D4; 3-0.5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (895951..897364)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (895951..897364)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Ubiquitin specific protease 10 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46200

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of mucin-type core-1 beta1-3 galactosyltransferase homologous enzymes in Drosophila melanogaster. Müller R, et al. FEBS J, 2005 Sep. PMID 16128800
  2. Requirement for a core 1 galactosyltransferase in the Drosophila nervous system. Lin YR, et al. Dev Dyn, 2008 Dec. PMID 18985719, Free PMC Article
  3. Ectopic expression screen identifies genes affecting Drosophila mesoderm development including the HSPG Trol. Trisnadi N, et al. G3 (Bethesda), 2014 Dec 23. PMID 25538103, Free PMC Article
  4. Genome-Wide Association Study of Circadian Behavior in Drosophila melanogaster. Harbison ST, et al. Behav Genet, 2019 Jan. PMID 30341464, Free PMC Article
  5. Phenotype-based clustering of glycosylation-related genes by RNAi-mediated gene silencing. Yamamoto-Hino M, et al. Genes Cells, 2015 Jun. PMID 25940448, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables beta-1,3-galactosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein glycosylation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG34056-PA
NP_001033979.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    895951..897364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001038890.2 → NP_001033979.1  uncharacterized protein Dmel_CG34056 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001033979.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q1WWC4, Q9W0L4
    Conserved Domains (1) summary
    cl21608
    Location:67 → 226
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W0L4 Q9W0L4

Gene LinkOut

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