U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gbp4.S guanylate binding protein 4 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379704, updated on 7-Sep-2023

Summary

Official Symbol
gbp4.S
Official Full Name
guanylate binding protein 4 S homeolog
Primary source
Xenbase:XB-GENE-6254965
Locus tag
XELAEV_18047956mg
See related
EnsemblRapid:ENSXLAG00005009595
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gbp4; mpa2; gbp4.L
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See gbp4.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (111254723..111265745, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (103564727..103575638, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene DELTA-thalatoxin-Avl1b-like Neighboring gene uncharacterized LOC108703277 Neighboring gene uncharacterized LOC108703278 Neighboring gene uncharacterized LOC121398976

Genomic regions, transcripts, and products

General protein information

Preferred Names
guanylate binding protein 4 S homeolog
Names
guanylate binding protein 4 L homeolog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086545.1NP_001080014.1  guanylate binding protein 4 S homeolog

    See identical proteins and their annotated locations for NP_001080014.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059315
    UniProtKB/TrEMBL
    Q6PCI2
    Related
    ENSXLAP00005028037.1, ENSXLAT00005028774.1
    Conserved Domains (2) summary
    cl20817
    Location:288483
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21455
    Location:24280
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    111254723..111265745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041577634.1XP_041433568.1  guanylate binding protein 4 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8ERF5, A0A974H207
    Conserved Domains (2) summary
    pfam02841
    Location:282483
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl38936
    Location:24280
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases