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gcg2 proglucagon II [ Xenopus laevis (African clawed frog) ]

Gene ID: 379477, updated on 6-Oct-2023

Summary

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Gene symbol
gcg2
Gene description
proglucagon II
Locus tag
XELAEV_18047135mg
See related
EnsemblRapid:ENSXLAG00005025039
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 9_10S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (63347592..63362236, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (56678956..56693597, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 4, sodium bicarbonate transporter, member 10 S homeolog Neighboring gene uncharacterized LOC108702970 Neighboring gene dipeptidyl-peptidase 4 S homeolog Neighboring gene interferon-induced helicase C domain-containing protein 1-like Neighboring gene grancalcin S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Xenopus proglucagon gene encodes novel GLP-1-like peptides with insulinotropic properties. Irwin DM, et al. Proc Natl Acad Sci U S A, 1997 Jul 22. PMID 9223287, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC64426

General protein information

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Preferred Names
glucagon-2
Names
glucagon II

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086318.2 → NP_001079787.1  glucagon-2 precursor

    See identical proteins and their annotated locations for NP_001079787.1

    Status: PROVISIONAL

    Source sequence(s)
    BC054234
    UniProtKB/Swiss-Prot
    O42144, Q5D082
    UniProtKB/TrEMBL
    A0A974BUM4
    Related
    ENSXLAP00005074250.1, ENSXLAT00005075830.1
    Conserved Domains (2) summary
    smart00070
    Location:53 → 79
    GLUCA; Glucagon like hormones
    pfam00123
    Location:97 → 123
    Hormone_2; Peptide hormone

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    63347592..63362236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041577620.1 → XP_041433554.1  glucagon-2 isoform X1

    UniProtKB/TrEMBL
    A0A1L8EP35, A0A974BUV7, A0A974H3F8
    Related
    ENSXLAP00005074219.1, ENSXLAT00005075794.1
    Conserved Domains (1) summary
    pfam00123
    Location:53 → 80
    Hormone_2; Peptide hormone

  2. XM_041577621.1 → XP_041433555.1  glucagon-2 isoform X1

    UniProtKB/TrEMBL
    A0A1L8EP35, A0A974BUV7, A0A974H3F8
    Conserved Domains (1) summary
    pfam00123
    Location:53 → 80
    Hormone_2; Peptide hormone

  3. XM_041577622.1 → XP_041433556.1  glucagon-2 isoform X2

    UniProtKB/TrEMBL
    A0A8J1LWW9, A0A974H3F8
    Conserved Domains (1) summary
    smart00070
    Location:53 → 79
    GLUCA; Glucagon like hormones
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O42144.1 GenPept UniProtKB/Swiss-Prot:O42144

Gene LinkOut

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