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tmem248.L transmembrane protein 248 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379429, updated on 7-Sep-2023

Summary

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Official Symbol
tmem248.L
Official Full Name
transmembrane protein 248 L homeolog
Primary source
Xenbase:XB-GENE-5803899
Locus tag
XELAEV_18011930mg
See related
EnsemblRapid:ENSXLAG00005012852
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
c7orf42; tmem248
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Genomic context

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See tmem248.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (50093874..50108906, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (48069689..48084738, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene nuclear cap binding subunit 3 L homeolog Neighboring gene leucine rich repeat containing 75A L homeolog Neighboring gene RAB guanine nucleotide exchange factor (GEF) 1 L homeolog Neighboring gene chemokine (C-C motif) ligand 5 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC64441

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transmembrane protein 248-like; uncharacterized protein LOC379429

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086271.1 → NP_001079740.1  Transmembrane protein 248-like

    See identical proteins and their annotated locations for NP_001079740.1

    Status: PROVISIONAL

    Source sequence(s)
    BC053800
    UniProtKB/TrEMBL
    A0A974HXN7, Q7SZ85
    Related
    ENSXLAP00005037856.1, ENSXLAT00005038767.1
    Conserved Domains (1) summary
    pfam14940
    Location:11 → 258
    TMEM219; Transmembrane 219

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    50093874..50108906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018244777.2 → XP_018100266.1  uncharacterized protein LOC379429 isoform X1

    UniProtKB/TrEMBL
    A0A8J0U3B8, A0A974HXN7
    Related
    ENSXLAP00005037865.1, ENSXLAT00005038776.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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