U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BMP1 bone morphogenetic protein 1 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 373360, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
BMP1
Gene description
bone morphogenetic protein 1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
Also known as
submp
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BMP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145595.1 (1077336..1120058, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577454.1 (163961..207125, complement)

NW_022145595.1Genomic Context describing neighboring genes Neighboring gene dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 Neighboring gene monocarboxylate transporter 13 Neighboring gene uncharacterized LOC100887831 Neighboring gene uncharacterized LOC115921548

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterization of a homolog of human bone morphogenetic protein 1 in the embryo of the sea urchin, Strongylocentrotus purpuratus. Hwang SP, et al. Development, 1994 Mar. PMID 8162855
  2. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
bone morphogenetic protein 1 homolog
NP_999728.1
XP_030834881.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214563.1 → NP_999728.1  bone morphogenetic protein 1 homolog precursor

    See identical proteins and their annotated locations for NP_999728.1

    Status: PROVISIONAL

    Source sequence(s)
    L23838
    UniProtKB/Swiss-Prot
    P98069
    Conserved Domains (4) summary
    cd04281
    Location:101 → 305
    ZnMc_BMP1_TLD; Zinc-dependent metalloprotease; BMP1/TLD-like subfamily. BMP1 (Bone morphogenetic protein 1) and TLD (tolloid)-like metalloproteases play vital roles in extracellular matrix formation, by cleaving precursor proteins such as enzymes, structural proteins, ...
    pfam00431
    Location:420 → 529
    CUB; CUB domain
    pfam01400
    Location:108 → 306
    Astacin; Astacin (Peptidase family M12A)
    pfam14670
    Location:542 → 572
    FXa_inhibition; Coagulation Factor Xa inhibitory site

RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145595.1 Reference Spur_5.0 Primary Assembly

    Range
    1077336..1120058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030979021.1 → XP_030834881.1  bone morphogenetic protein 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A7M7NDI2
    Conserved Domains (3) summary
    cd04281
    Location:101 → 305
    ZnMc_BMP1_TLD; Zinc-dependent metalloprotease; BMP1/TLD-like subfamily. BMP1 (Bone morphogenetic protein 1) and TLD (tolloid)-like metalloproteases play vital roles in extracellular matrix formation, by cleaving precursor proteins such as enzymes, structural proteins, ...
    pfam00431
    Location:420 → 529
    CUB; CUB domain
    pfam14670
    Location:692 → 727
    FXa_inhibition; Coagulation Factor Xa inhibitory site

RNA

  1. XR_004062984.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P98069.1 GenPept UniProtKB/Swiss-Prot:P98069

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.