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SPF1 ion-transporting P-type ATPase [ Candida albicans SC5314 ]

Gene ID: 3646573, updated on 30-Nov-2023

Summary

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Gene symbol
SPF1
Gene description
ion-transporting P-type ATPase
Locus tag
CAALFM_C206540CA
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See SPF1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_032090.1 (1325586..1329257, complement)

Chromosome 2 - NC_032090.1Genomic Context describing neighboring genes Neighboring gene thiamine transporter Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032090.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
  2. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
  3. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type ion transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ion-transporting P-type ATPase
XP_711837.1
  • P-type calcium-transporting ATPase, involved in control of calcium homeostasis, response to ER stress, hyphal growth, biofilm formation and virulence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_032090.1 Reference assembly

    Range
    1325586..1329257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_706745.2 → XP_711837.1  ion-transporting P-type ATPase [Candida albicans SC5314]

    See identical proteins and their annotated locations for XP_711837.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4YIW4, Q59Q34
    Conserved Domains (4) summary
    COG4087
    Location:793 → 839
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01657
    Location:41 → 1185
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
    pfam00122
    Location:220 → 391
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:538 → 615
    Cation_ATPase; Cation transport ATPase (P-type)
Nucleotide Protein
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