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AFUA_5G08300 alpha-actinin, sarcomeric (f-actin cross linking protein) [ Aspergillus fumigatus Af293 ]

Gene ID: 3511268, updated on 31-Jan-2024

Summary

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Gene symbol
AFUA_5G08300
Gene description
alpha-actinin, sarcomeric (f-actin cross linking protein)
Locus tag
AFUA_5G08300
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu5g08300
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Genomic context

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See AFUA_5G08300 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_007198.1 (2107228..2109474)

Chromosome 5 - NC_007198.1Genomic Context describing neighboring genes Neighboring gene tRNA a64-2'-o-ribosylphosphate transferase Neighboring gene aldo-keto reductase, putative Neighboring gene RNA binding protein, putative Neighboring gene WD repeat protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007198.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-actinin, sarcomeric (f-actin cross linking protein)
XP_753806.1
  • encoded by transcript AFUA_5G08300A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007198.1 Reference assembly

    Range
    2107228..2109474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_748713.1 → XP_753806.1  alpha-actinin, sarcomeric (f-actin cross linking protein) [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_753806.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A229XT94, B0Y3Y4, Q4WUF8
    Conserved Domains (1) summary
    COG5069
    Location:5 → 630
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Nucleotide Protein
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