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AFUA_5G07040 ubiquitin conjugating enzyme (UbcA), putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3511056, updated on 30-Nov-2023

Summary

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Gene symbol
AFUA_5G07040
Gene description
ubiquitin conjugating enzyme (UbcA), putative
Locus tag
AFUA_5G07040
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu5g07040
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Genomic context

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See AFUA_5G07040 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_007198.1 (1743124..1744270, complement)

Chromosome 5 - NC_007198.1Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis ABC transporter Arb1, putative Neighboring gene cyclin Ccl1, putative Neighboring gene proteasome regulatory particle subunit Rpt2, putative Neighboring gene WD repeat protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007198.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin conjugating enzyme (UbcA), putative
XP_753930.1
  • encoded by transcript AFUA_5G07040A
    similar to UBC1 ubiquitin-conjugating enzyme (GI:136635) [Saccharomyces cerevisiae]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007198.1 Reference assembly

    Range
    1743124..1744270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_748837.1 → XP_753930.1  ubiquitin conjugating enzyme (UbcA), putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_753930.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0Y3L1, Q4WU34
    Conserved Domains (3) summary
    COG5078
    Location:1 → 147
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cd00195
    Location:6 → 147
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
    cl21463
    Location:191 → 234
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
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