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AFUA_1G16330 ribosome assembly protein Noc2, putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3510024, updated on 3-Apr-2024

Summary

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Gene symbol
AFUA_1G16330
Gene description
ribosome assembly protein Noc2, putative
Locus tag
AFUA_1G16330
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu1g16330
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Genomic context

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See AFUA_1G16330 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_007194.1 (4435277..4437643)

Chromosome 1 - NC_007194.1Genomic Context describing neighboring genes Neighboring gene glucose-inducible SAM-dependent methyltransferase Rrg1, putative Neighboring gene vacuolar protein sorting-associated protein Vps28, putative Neighboring gene potassium transporter, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007194.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 4437542-4437621 rpt_type = tandem , rpt_unit_seq = gaagaggaggaa , satellite = microsatellite
  • Loc: 4437542-4437624 rpt_type = tandem , rpt_unit_seq = gaagaggaggaagaa , satellite = microsatellite
  • Loc: 4437542-4437628 rpt_type = tandem , rpt_unit_seq = gga , satellite = microsatellite
  • Loc: 4437545-4437624 rpt_type = tandem , rpt_unit_seq = gaggag , satellite = microsatellite

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Noc1p-Noc2p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Noc2p-Noc3p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome assembly protein Noc2, putative
XP_752999.1
  • encoded by transcript AFUA_1G16330A
    similar to ribosome assembly protein Noc2p (GI:6324780) [Saccharomyces cerevisiae]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007194.1 Reference assembly

    Range
    4435277..4437643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_747906.1 → XP_752999.1  ribosome assembly protein Noc2, putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_752999.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8H4I6B1, B0XNU2, Q4WRH1
    Conserved Domains (1) summary
    pfam03715
    Location:396 → 706
    Noc2; Noc2p family
Nucleotide Protein
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