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AFUA_4G10780 ubiquitin-protein ligase (Tom1), putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3509288, updated on 30-Nov-2023

Summary

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Gene symbol
AFUA_4G10780
Gene description
ubiquitin-protein ligase (Tom1), putative
Locus tag
AFUA_4G10780
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu4g10780
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Genomic context

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See AFUA_4G10780 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_007197.1 (2802985..2815499)

Chromosome 4 - NC_007197.1Genomic Context describing neighboring genes Neighboring gene steroid alpha reductase family protein Neighboring gene fatty acid oxygenase PpoA, putative Neighboring gene phosphoribosyl diphosphate synthase isoform 4 Neighboring gene 40S ribosomal protein S6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007197.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-protein ligase (Tom1), putative
XP_751749.1
  • encoded by transcript AFUA_4G10780A
    similar to E3 ubiquitin protein ligase; temperature dependent organization in oitotic nucleus; Tom1p (GI:927738) [Saccharomyces cerevisiae]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007197.1 Reference assembly

    Range
    2802985..2815499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_746656.1 → XP_751749.1  ubiquitin-protein ligase (Tom1), putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_751749.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0Y6R3, Q4WPX3
    Conserved Domains (6) summary
    smart00119
    Location:3704 → 4033
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:3680 → 4036
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam06012
    Location:120 → 489
    DUF908; Domain of Unknown Function (DUF908)
    pfam06025
    Location:552 → 1002
    DUF913; Domain of Unknown Function (DUF913)
    pfam14377
    Location:2944 → 3051
    DUF4414; Domain of unknown function (DUF4414)
    cl19417
    Location:2412 → 2448
    FYDLN_acid; Protein of unknown function (FYDLN_acid)
Nucleotide Protein
Heading Accession and Version

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