U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AFUA_6G09980 patched sphingolipid transporter (Ncr1), putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3508192, updated on 31-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
AFUA_6G09980
Gene description
patched sphingolipid transporter (Ncr1), putative
Locus tag
AFUA_6G09980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu6g09980
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AFUA_6G09980 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Sequence:
Chromosome: 6; NC_007199.1 (2454280..2458241)

Chromosome 6 - NC_007199.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene oxidoreductase, short chain dehydrogenase/reductase family Neighboring gene importin beta-4 subunit, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_007199.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
patched sphingolipid transporter (Ncr1), putative
XP_750887.1
  • encoded by transcript AFUA_6G09980A
    similar to transmembrane glycoprotein involved in sphingolipid metabolism; Ncr1p (GI:6325251) [Saccharomyces cerevisiae]

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007199.1 Reference assembly

    Range
    2454280..2458241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_745794.1 → XP_750887.1  patched sphingolipid transporter (Ncr1), putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_750887.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0Y842, Q4WMG5
    Conserved Domains (3) summary
    TIGR00917
    Location:38 → 1237
    2A060601; Niemann-Pick C type protein family
    pfam12349
    Location:631 → 786
    Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
    pfam16414
    Location:36 → 270
    NPC1_N; Niemann-Pick C1 N terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases