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AFUA_6G04230 RING finger protein [ Aspergillus fumigatus Af293 ]

Gene ID: 3505156, updated on 31-Jan-2024

Summary

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Gene symbol
AFUA_6G04230
Gene description
RING finger protein
Locus tag
AFUA_6G04230
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu6g04230
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Genomic context

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See AFUA_6G04230 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Sequence:
Chromosome: 6; NC_007199.1 (948498..950360, complement)

Chromosome 6 - NC_007199.1Genomic Context describing neighboring genes Neighboring gene mannosyl-oligosaccharide glucosidase, putative Neighboring gene hypothetical protein Neighboring gene PAP2 domain protein Neighboring gene pheromone-dependent cell cycle arrest protein Far11, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007199.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein
XP_747655.1
  • encoded by transcript AFUA_6G04230A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007199.1 Reference assembly

    Range
    948498..950360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_742562.1 → XP_747655.1  RING finger protein [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_747655.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A229WPU7, B0YD29, Q4WDC1
    Conserved Domains (4) summary
    cd00162
    Location:202 → 252
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    pfam01485
    Location:292 → 384
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:9 → 159
    RWD; RWD domain
    cl17238
    Location:200 → 252
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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