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PCHAS_1110400 stearoyl-CoA desaturase, putative [ Plasmodium chabaudi chabaudi ]

Gene ID: 3497625, updated on 17-May-2024

Summary

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Gene symbol
PCHAS_1110400
Gene description
stearoyl-CoA desaturase, putative
Primary source
PlasmoDB:PCHAS_1110400
Locus tag
PCHAS_1110400
See related
VEuPathDB:PCHAS_1110400
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium chabaudi chabaudi (strain: AS, sub-species: chabaudi)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia)
Old locus tag
PCHAS_111040
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Genomic context

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Location:
chromosome: 11
Exon count:
2
Sequence:
Chromosome: 11; NC_030111.2 (367796..370708)

Chromosome 11 - NC_030111.2Genomic Context describing neighboring genes Neighboring gene translationally-controlled tumor protein homolog, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene MORN repeat protein, putative Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030111.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive evaluation of rodent malaria parasite genomes and gene expression. Otto TD, et al. BMC Biol, 2014 Oct 30. PMID 25359557, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030111.2 Reference assembly

    Range
    367796..370708
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_739418.2 → XP_744511.2  stearoyl-CoA desaturase, putative [Plasmodium chabaudi chabaudi]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1C6YJ98, A0A4V0K985
    Conserved Domains (2) summary
    cd03505
    Location:358 → 596
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
    cl00615
    Location:701 → 911
    Membrane-FADS-like; The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins. They are present in all groups of organisms with the ...
Nucleotide Protein
Heading Accession and Version

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