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PCHAS_0933500 HECT-like E3 ubiquitin ligase, putative [ Plasmodium chabaudi chabaudi ]

Gene ID: 3488863, updated on 17-May-2024

Summary

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Gene symbol
PCHAS_0933500
Gene description
HECT-like E3 ubiquitin ligase, putative
Primary source
PlasmoDB:PCHAS_0933500
Locus tag
PCHAS_0933500
See related
VEuPathDB:PCHAS_0933500
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium chabaudi chabaudi (strain: AS, sub-species: chabaudi)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia)
Old locus tag
PCHAS_093350
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Sequence:
Chromosome: 9; NC_030109.2 (1209952..1231743, complement)

Chromosome 9 - NC_030109.2Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene alpha/beta hydrolase, putative Neighboring gene SPRY domain, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030109.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive evaluation of rodent malaria parasite genomes and gene expression. Otto TD, et al. BMC Biol, 2014 Oct 30. PMID 25359557, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HECT-like E3 ubiquitin ligase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030109.2 Reference assembly

    Range
    1209952..1231743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_730772.2 → XP_735865.2  HECT-like E3 ubiquitin ligase, putative [Plasmodium chabaudi chabaudi]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D3RX48, A0A4V0K7F2
    Conserved Domains (2) summary
    cd00078
    Location:6907 → 7261
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam06012
    Location:115 → 416
    DUF908; Domain of Unknown Function (DUF908)
Nucleotide Protein
Heading Accession and Version

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