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cgd8_1270 clathrin heavy chain [ Cryptosporidium parvum Iowa II ]

Gene ID: 3374266, updated on 17-May-2024

Summary

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Gene symbol
cgd8_1270
Gene description
clathrin heavy chain
Primary source
ApiDB_CryptoDB:cgd8_1270
Locus tag
cgd8_1270
Gene type
protein coding
RNA name
clathrin heavy chain
RefSeq status
PROVISIONAL
Organism
Cryptosporidium parvum Iowa II (isolate: Iowa type II)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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Genomic context

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Location:
chromosome: 8
Exon count:
1
Sequence:
Chromosome: 8; NC_006987.1 (345686..351709, complement)

Chromosome 8 - NC_006987.1Genomic Context describing neighboring genes Neighboring gene SEC24C-like component of COPII coatamer of ER-golgi vesicles Neighboring gene hypothetical protein Neighboring gene centrin, caltractin Neighboring gene integral membrane protein with 8 transmembrane domains, likely plant origin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006987.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Abrahamsen MS, et al. Science, 2004 Apr 16. PMID 15044751

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin coat of coated pit IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin coat of trans-Golgi network vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
clathrin heavy chain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006987.1 Reference assembly

    Range
    345686..351709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_627034.1 → XP_627034.1  clathrin heavy chain [Cryptosporidium parvum Iowa II]

    See identical proteins and their annotated locations for XP_627034.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7S7LDH6, Q5CW85
    Conserved Domains (4) summary
    sd00006
    Location:1431 → 1454
    TPR; TPR repeat [structural motif]
    pfam00637
    Location:1024 → 1147
    Clathrin; Region in Clathrin and VPS
    pfam13838
    Location:393 → 455
    Clathrin_H_link; Clathrin-H-link
    cl26078
    Location:903 → 1000
    Clathrin; Region in Clathrin and VPS
Nucleotide Protein
Heading Accession and Version

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