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CG17660 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33347, updated on 18-Sep-2024

Summary

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Official Symbol
CG17660provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031356
Locus tag
Dmel_CG17660
See related
AllianceGenome:FB:FBgn0031356
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG17660
Summary
Predicted to be involved in retrograde transport, endosome to Golgi. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and membrane. Is expressed in adult head. Orthologous to human TMEM87A (transmembrane protein 87A) and TMEM87B (transmembrane protein 87B). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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Location:
22B1-22B1; 2-3 cM
Exon count:
10
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (1707132..1710421, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (1707132..1710421, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Chronologically inappropriate morphogenesis Neighboring gene antisense RNA:CR44976 Neighboring gene capping protein beta Neighboring gene mitochondrial ribosomal protein L48 Neighboring gene fritz Neighboring gene Replication in mitochondria 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The WD40 repeat protein fritz links cytoskeletal planar polarity to frizzled subcellular localization in the Drosophila epidermis. Collier S, et al. Genetics, 2005 Apr. PMID 15654087, Free PMC Article
  2. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
  3. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article
  4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in retrograde transport, endosome to Golgi IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17660-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    1707132..1710421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134768.4 → NP_608612.3  uncharacterized protein Dmel_CG17660 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608612.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q961L7, Q9VQ34
    Related
    FBpp0077578
    Conserved Domains (1) summary
    pfam06814
    Location:160 → 444
    Lung_7-TM_R; Lung seven transmembrane receptor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VQ34 Q9VQ34

Gene LinkOut

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