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thrC putative threonine synthase [ Bacteroides fragilis NCTC 9343 ]

Gene ID: 3287627, discontinued on 6-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
thrC
Gene description
putative threonine synthase
Locus tag
BF9343_0535
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacteroides fragilis NCTC 9343 (culture-collection: NCTC:9343)
Lineage
Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003228.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 668446-669369 Pfam match to entry PF00291 PALP, Pyridoxal-phosphate dependent enzyme, score 90.5, E-value 2.8e-24
  • Loc: 668506-668550 PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site.

General protein information

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Names
putative threonine synthase
YP_210272.1
  • Similar to Escherichia coli threonine synthase ThrC or B0004 SWALL:THRC_ECOLI (SWALL:P00934) (428 aa) fasta scores: E(): 3.5e-67, 44.34% id in 433 aa, and to Bacteroides thetaiotaomicron threonine synthase BT2401 SWALL:AAO77508 (EMBL:AE016935) (433 aa) fasta scores: E(): 3.3e-150, 88.63% id in 431 aa, and to Chlorobium tepidum threonine synthase ThrC or CT2035 SWALL:Q8KAW6 (EMBL:AE012953) (441 aa) fasta scores: E(): 6.6e-73, 45.39% id in 434 aa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003228.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_210272.1 putative threonine synthase [Bacteroides fragilis NCTC 9343]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5LHR6.1

Gene LinkOut

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