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pflA putative pyruvate formate-lyase 1 activating enzyme [ Bacteroides fragilis NCTC 9343 ]

Gene ID: 3286151, discontinued on 6-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
pflA
Gene description
putative pyruvate formate-lyase 1 activating enzyme
Locus tag
BF9343_1258
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacteroides fragilis NCTC 9343 (culture-collection: NCTC:9343)
Lineage
Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Also known as
act
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003228.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c1586291-1585815 Pfam match to entry PF04055 Radical_SAM, Radical SAM superfamily, score 104.0, E-value 2.4e-28
  • Loc: c1586309-1586244 PS01087 Radical activating enzymes signature.

General protein information

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Names
putative pyruvate formate-lyase 1 activating enzyme
YP_210984.1
  • Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri pyruvate formate-lyase 1 activating enzyme PflA or Act or B0902 or C1038 or Z1246 or ECS0985 or SF0897 or S0961 SWALL:PFLA_ECOLI (SWALL:P09374) (245 aa) fasta scores: E(): 3e-38, 45.29% id in 234 aa, and to Bacteroides thetaiotaomicron pyruvate formate-lyase activating enzyme BT4737 SWALL:AAO79842 (EMBL:AE016946) (242 aa) fasta scores: E(): 6.1e-81, 81.74% id in 241 aa, and to Vibrio cholerae pyruvate formate-lyase 1 activating enzyme VC1869 SWALL:Q9KQX8 (EMBL:AE004263) (246 aa) fasta scores: E(): 4.5e-39, 46.86% id in 239 aa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003228.3 Reference assembly

    Range
    1585626..1586351 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_210984.1 putative pyruvate formate-lyase 1 activating enzyme [Bacteroides fragilis NCTC 9343]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5LFQ4.1

Gene LinkOut

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