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plcl5 phospholipase C like 5 [ Danio rerio (zebrafish) ]

Gene ID: 327464, updated on 27-Mar-2024

Summary

Official Symbol
plcl5provided by ZNC
Official Full Name
phospholipase C like 5provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5675
See related
Ensembl:ENSDARG00000062575 AllianceGenome:ZFIN:ZDB-GENE-030131-5675
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fi12h03; wu:fi12h03; si:ch211-210g13.5
Summary
Predicted to enable phosphatidylinositol phospholipase C activity. Predicted to be involved in phosphatidylinositol-mediated signaling. Predicted to act upstream of or within intracellular signal transduction and lipid catabolic process. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See plcl5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (17359921..17523608)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (17210364..17373382)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene signal transducer and activator of transcription 3 (acute-phase response factor) Neighboring gene signal transducer and activator of transcription 5a Neighboring gene potassium voltage-gated channel, subfamily H (eag-related), member 4a Neighboring gene hypocretin (orexin) neuropeptide precursor

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
inactive phospholipase C-like protein 2; uncharacterized protein LOC327464
XP_002661169.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    17359921..17523608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002661123.6XP_002661169.2  inactive phospholipase C-like protein 2

    UniProtKB/TrEMBL
    A0A8M1RDE4
    Related
    ENSDARP00000085109.5, ENSDART00000090676.6
    Conserved Domains (6) summary
    cd00275
    Location:742870
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08597
    Location:413710
    PI-PLCc_PRIP_metazoa; Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein
    PLN02228
    Location:324872
    PLN02228; Phosphoinositide phospholipase C
    cd13364
    Location:131239
    PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
    pfam00169
    Location:131239
    PH; PH domain
    pfam09279
    Location:331413
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like