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CNH02570 ABC transporter, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3259059, updated on 17-May-2024

Summary

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Gene symbol
CNH02570
Gene description
ABC transporter, putative
Primary source
FungiDB:CNH02570
Locus tag
CNH02570
Gene type
protein coding
RNA name
ABC transporter, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNH02570 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Sequence:
Chromosome: 8; NC_006693.1 (396954..401178, complement)

Chromosome 8 - NC_006693.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene cleft lip and palate associated transmembrane protein, putative Neighboring gene phosphoethanolamine N-methyltransferase, putative Neighboring gene syntaxin, putative Neighboring gene hypothetical protein Neighboring gene cellular morphogenesis-related protein, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006693.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ABC transporter, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006693.1 Reference assembly

    Range
    396954..401178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_572433.1 → XP_572433.1  ABC transporter, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_572433.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q55IS2, Q5KCX7
    Conserved Domains (4) summary
    cd03253
    Location:613 → 848
    ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
    COG1132
    Location:272 → 848
    MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]
    pfam00664
    Location:299 → 567
    ABC_membrane; ABC transporter transmembrane region
    pfam05466
    Location:880 → 1040
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
Nucleotide Protein
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