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CNH00630 Rab guanyl-nucleotide exchange factor, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3258998, updated on 17-May-2024

Summary

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Gene symbol
CNH00630
Gene description
Rab guanyl-nucleotide exchange factor, putative
Locus tag
CNH00630
See related
FungiDB:CNH00630; VEuPathDB:CNH00630
Gene type
protein coding
RNA name
Rab guanyl-nucleotide exchange factor, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Sequence:
Chromosome: 8; NC_006693.1 (1001226..1004446)

Chromosome 8 - NC_006693.1Genomic Context describing neighboring genes Neighboring gene expressed protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene cation:cation antiporter, putative Neighboring gene helicase, putative Neighboring gene specific RNA polymerase II transcription factor, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006693.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type vacuole membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Rab guanyl-nucleotide exchange factor, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006693.1 Reference assembly

    Range
    1001226..1004446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_572256.2 → XP_572256.2  Rab guanyl-nucleotide exchange factor, putative [Cryptococcus neoformans var. neoformans JEC21]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5KCD5
    Conserved Domains (3) summary
    pfam00637
    Location:298 → 404
    Clathrin; Region in Clathrin and VPS
    pfam10366
    Location:157 → 258
    Vps39_1; Vacuolar sorting protein 39 domain 1
    pfam10367
    Location:451 → 560
    Vps39_2; Vacuolar sorting protein 39 domain 2
Nucleotide Protein
Heading Accession and Version

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